Sonny Software

Hello, after collating my previous libraries held in Zotero and Papers3, and finally setting up various setting to import and rename files, remove duplicated entries and journal names, etc. (see my previous post here recently), I believe I have Bookends set up properly for the future. However, I sti...

Hi Jon, just to let you know that it all worked out. It wasn't a PubMed filter, I think these double entries must have been a leftover from importing papers from Zotero and Papers. Anyway, I filtered out these entries with the SQL query (easy-peasy) and cleaned up the names. Also, Global Change menu...

Ah, you are right, these entries have journal names in both formats... Arghhh, this is going to be such a pain to correct!

Thank you very much for all your help, Jon, it's much appreciated!

Best
yot

Hi Jon, thank you for this - I did RTFM and set up the custom name formatting for the attachments! However, when I subsequently ran "Refs → Global Change → Rename attachments → Entire library", the journal field, instead of being an abbreviated journal name (e.g. Nat Genet) is included in ...

Hi Jon,

this worked great, thank you very much!

yot

Hello again, is it possible to have a custom format for file rename? I am using Author Date currently, but this results in very (very...) long file names, as often also the full journal name is included. My ideal format would be [first author surname]_[journal abbreviation]_[date].pdf - is it possib...

Hi, is is possible to select only references that have multiple attachments (as depicted by 2 paperclip icons?). I find that sometimes multiple attachments are legitimate (e.g. a paper + supplementary materials) but more often it is a result of bad import where a pdf file of the same paper is not re...